feat: support in-repo .codex/config.toml entries as sources of config info (#8354)

- We now support `.codex/config.toml` in repo (from `cwd` up to the
first `.git` found, if any) as layers in `ConfigLayerStack`. A new
`ConfigLayerSource::Project` variant was added to support this.
- In doing this work, I realized that we were resolving relative paths
in `config.toml` after merging everything into one `toml::Value`, which
is wrong: paths should be relativized with respect to the folder
containing the `config.toml` that was deserialized. This PR introduces a
deserialize/re-serialize strategy to account for this in
`resolve_config_paths()`. (This is why `Serialize` is added to so many
types as part of this PR.)
- Added tests to verify this new behavior.



---
[//]: # (BEGIN SAPLING FOOTER)
Stack created with [Sapling](https://sapling-scm.com). Best reviewed
with [ReviewStack](https://reviewstack.dev/openai/codex/pull/8354).
* #8359
* __->__ #8354

codex-rs/core/src/config/mod.rs

@@ -43,6 +43,7 @@ use codex_utils_absolute_path::AbsolutePathBuf;
 use codex_utils_absolute_path::AbsolutePathBufGuard;
 use dirs::home_dir;
 use serde::Deserialize;
+use serde::Serialize;
 use similar::DiffableStr;
 use std::collections::BTreeMap;
 use std::collections::HashMap;
@@ -664,7 +665,7 @@ pub fn set_default_oss_provider(codex_home: &Path, provider: &str) -> std::io::R
 }
 
 /// Base config deserialized from ~/.codex/config.toml.
-#[derive(Deserialize, Debug, Clone, Default, PartialEq)]
+#[derive(Serialize, Deserialize, Debug, Clone, Default, PartialEq)]
 pub struct ConfigToml {
     /// Optional override of model selection.
     pub model: Option<String>,
@@ -853,7 +854,7 @@ impl From<ConfigToml> for UserSavedConfig {
     }
 }
 
-#[derive(Deserialize, Debug, Clone, PartialEq, Eq)]
+#[derive(Serialize, Deserialize, Debug, Clone, PartialEq, Eq)]
 pub struct ProjectConfig {
     pub trust_level: Option<TrustLevel>,
 }
@@ -868,7 +869,7 @@ impl ProjectConfig {
     }
 }
 
-#[derive(Deserialize, Debug, Clone, Default, PartialEq)]
+#[derive(Serialize, Deserialize, Debug, Clone, Default, PartialEq)]
 pub struct ToolsToml {
     #[serde(default, alias = "web_search_request")]
     pub web_search: Option<bool>,
@@ -887,7 +888,7 @@ impl From<ToolsToml> for Tools {
     }
 }
 
-#[derive(Deserialize, Debug, Clone, Default, PartialEq, Eq)]
+#[derive(Serialize, Deserialize, Debug, Clone, Default, PartialEq, Eq)]
 pub struct GhostSnapshotToml {
     /// Exclude untracked files larger than this many bytes from ghost snapshots.
     #[serde(alias = "ignore_untracked_files_over_bytes")]