app-server: add v2 filesystem APIs (#14245)

Add a protocol-level filesystem surface to the v2 app-server so Codex
clients can read and write files, inspect directories, and subscribe to
path changes without relying on host-specific helpers.

High-level changes:
- define the new v2 fs/readFile, fs/writeFile, fs/createDirectory,
fs/getMetadata, fs/readDirectory, fs/remove, fs/copy RPCs
- implement the app-server handlers, including absolute-path validation,
base64 file payloads, recursive copy/remove semantics
- document the API, regenerate protocol schemas/types, and add
end-to-end tests for filesystem operations, copy edge cases

Testing plan:
- validate protocol serialization and generated schema output for the
new fs request, response, and notification types
- run app-server integration coverage for file and directory CRUD paths,
metadata/readDirectory responses, copy failure modes, and absolute-path
validation

codex-rs/app-server/tests/suite/v2/mod.rs

@@ -12,6 +12,7 @@ mod connection_handling_websocket_unix;
 mod dynamic_tools;
 mod experimental_api;
 mod experimental_feature_list;
+mod fs;
 mod initialize;
 mod mcp_server_elicitation;
 mod model_list;