## Why
`codex-rs/core/src/lib.rs` re-exported a broad set of types and modules
from `codex-protocol` and `codex-shell-command`. That made it easy for
workspace crates to import those APIs through `codex-core`, which in
turn hides dependency edges and makes it harder to reduce compile-time
coupling over time.
This change removes those public re-exports so call sites must import
from the source crates directly. Even when a crate still depends on
`codex-core` today, this makes dependency boundaries explicit and
unblocks future work to drop `codex-core` dependencies where possible.
## What Changed
- Removed public re-exports from `codex-rs/core/src/lib.rs` for:
- `codex_protocol::protocol` and related protocol/model types (including
`InitialHistory`)
- `codex_protocol::config_types` (`protocol_config_types`)
- `codex_shell_command::{bash, is_dangerous_command, is_safe_command,
parse_command, powershell}`
- Migrated workspace Rust call sites to import directly from:
- `codex_protocol::protocol`
- `codex_protocol::config_types`
- `codex_protocol::models`
- `codex_shell_command`
- Added explicit `Cargo.toml` dependencies (`codex-protocol` /
`codex-shell-command`) in crates that now import those crates directly.
- Kept `codex-core` internal modules compiling by using `pub(crate)`
aliases in `core/src/lib.rs` (internal-only, not part of the public
API).
- Updated the two utility crates that can already drop a `codex-core`
dependency edge entirely:
- `codex-utils-approval-presets`
- `codex-utils-cli`
## Verification
- `cargo test -p codex-utils-approval-presets`
- `cargo test -p codex-utils-cli`
- `cargo check --workspace --all-targets`
- `just clippy`
Fixes#8214 by removing the '--staged' flag from the undo git restore
command. This ensures that while the working tree is reverted to the
snapshot state, the user's staged changes (index) are preserved,
preventing data loss. Also adds a regression test.
## Summary
- update documentation, example configs, and automation defaults to
reference gpt-5.1 / gpt-5.1-codex
- bump the CLI and core configuration defaults, model presets, and error
messaging to the new models while keeping the model-family/tool coverage
for legacy slugs
- refresh tests, fixtures, and TUI snapshots so they expect the upgraded
defaults
## Testing
- `cargo test -p codex-core
config::tests::test_precedence_fixture_with_gpt5_profile`
------
[Codex
Task](https://chatgpt.com/codex/tasks/task_i_6916c5b3c2b08321ace04ee38604fc6b)
