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## Why
`PreToolUse` already exposes `updatedInput` in its hook output schema,
but Codex currently rejects it instead of applying the rewrite. That
leaves hook authors unable to make the documented pre-execution
adjustment to a tool call before it runs.
## What
- Accept `updatedInput` from `PreToolUse` hooks when paired with
`permissionDecision: "allow"`.
- Apply the rewritten input before dispatch so the tool executes the
updated payload, not the original one.
- Preserve the stable hook-facing compatibility shapes that
participating tool handlers expose:
- Bash-like tools (`shell`, `container.exec`, `local_shell`,
`shell_command`, `exec_command`) use `{ "command": ... }`.
- `apply_patch` exposes its patch body through the same command-shaped
hook contract.
- MCP tools expose their JSON argument object directly.
- Keep each participating tool handler responsible for translating
hook-facing `updatedInput` back into its concrete invocation shape.
## Verification
Direct Bash-like rewrite coverage:
- `pre_tool_use_rewrites_shell_before_execution`
- `pre_tool_use_rewrites_container_exec_before_execution`
- `pre_tool_use_rewrites_local_shell_before_execution`
- `pre_tool_use_rewrites_shell_command_before_execution`
- `pre_tool_use_rewrites_exec_command_before_execution`
These cases assert that each supported Bash-like surface runs only the
rewritten command while the hook still observes the original `{
"command": ... }` input.
`pre_tool_use_rewrites_apply_patch_before_execution`
- Model emits one patch.
- Hook swaps in a different patch.
- Asserts only the rewritten file is created, and the hook saw the
original patch.
`pre_tool_use_rewrites_code_mode_nested_exec_command_before_execution`
- Model runs one nested shell command from code mode.
- Hook rewrites it.
- Asserts only the rewritten command runs, and the hook saw the original
nested input.
`pre_tool_use_rewrites_mcp_tool_before_execution`
- Model calls the RMCP echo tool.
- Hook rewrites the MCP arguments.
- Asserts the MCP server receives and returns the rewritten message, not
the original one.