## Why This PR make the `morpheus` agent (memory phase 2) use a git diff to start it's consolidation. The workflow is the following: 1. The agent acquire a lock 2. If `.codex/memories` does not exist or is not a git root, initialize everything (and make a first empty commit) 3. Update `raw_memories.md` and `rollout_summaries/` as before. Basically we select max N phase 1 memories based on a given policy 4. We use git (`gix`) to get a diff between the current state of `.codex/memories` and the last commit. 5. Dump the diff in `phase2_workspace_diff.md` 6. Spawn `morpheus` and point it to `phase2_workspace_diff.md` 7. Wait for `morpheus` to be done 8. Re-create a new `.git` and make one single commit on it. We do this because we don't want to preserve history through `.git` and this is cheap anyway 9. We release the lock On top of this, we keep the retry policies etc etc The goals of this new workflow are: * Better support of any memory extensions such as `chronicle` * Allow the user to manually edit memories and this will be considered by the phase 2 agent As a follow-up we will need to add support for user's edition while `morpheus` is running ## What Changed - Added memory workspace helpers that prepare the git baseline, compute the diff, write `phase2_workspace_diff.md`, and reset the baseline after successful consolidation. - Updated Phase 2 to sync current inputs into `raw_memories.md` and `rollout_summaries/`, prune old extension resources, skip clean workspaces, and run the consolidation subagent only when the workspace has changes. - Tightened Phase 2 job ownership around long-running consolidation with heartbeats and an ownership check before resetting the baseline. - Simplified the prompt and state APIs so DB watermarks are bookkeeping, while workspace dirtiness decides whether consolidation work exists. - Updated the memory pipeline README and tests for workspace diffs, extension-resource cleanup, pollution-driven forgetting, selection ranking, and baseline persistence. ## Verification - Added/updated coverage in `core/src/memories/tests.rs`, `core/src/memories/workspace_tests.rs`, `state/src/runtime/memories.rs`, and `core/tests/suite/memories.rs`. --------- Co-authored-by: Codex <noreply@openai.com>
codex-core
This crate implements the business logic for Codex. It is designed to be used by the various Codex UIs written in Rust.
Dependencies
Note that codex-core makes some assumptions about certain helper utilities being available in the environment. Currently, this support matrix is:
macOS
Expects /usr/bin/sandbox-exec to be present.
When using the workspace-write sandbox policy, the Seatbelt profile allows
writes under the configured writable roots while keeping .git (directory or
pointer file), the resolved gitdir: target, and .codex read-only.
Network access and filesystem read/write roots are controlled by
SandboxPolicy. Seatbelt consumes the resolved policy and enforces it.
Seatbelt also keeps the legacy default preferences read access
(user-preference-read) needed for cfprefs-backed macOS behavior.
Linux
Expects the binary containing codex-core to run the equivalent of codex sandbox linux (legacy alias: codex debug landlock) when arg0 is codex-linux-sandbox. See the codex-arg0 crate for details.
Legacy SandboxPolicy / sandbox_mode configs are still supported on Linux.
They can continue to use the legacy Landlock path when the split filesystem
policy is sandbox-equivalent to the legacy model after cwd resolution.
Split filesystem policies that need direct FileSystemSandboxPolicy
enforcement, such as read-only or denied carveouts under a broader writable
root, automatically route through bubblewrap. The legacy Landlock path is used
only when the split filesystem policy round-trips through the legacy
SandboxPolicy model without changing semantics. That includes overlapping
cases like /repo = write, /repo/a = none, /repo/a/b = write, where the
more specific writable child must reopen under a denied parent.
The Linux sandbox helper prefers the first bwrap found on PATH outside the
current working directory whenever it is available. If bwrap is present but
too old to support --argv0, the helper keeps using system bubblewrap and
switches to a no---argv0 compatibility path for the inner re-exec. If
bwrap is missing, it falls back to the vendored bubblewrap path compiled into
the binary and Codex surfaces a startup warning through its normal notification
path instead of printing directly from the sandbox helper. Codex also surfaces
a startup warning when bubblewrap cannot create user namespaces. WSL2 uses the
normal Linux bubblewrap path. WSL1 is not supported for bubblewrap sandboxing
because it cannot create the required user namespaces, so Codex rejects
sandboxed shell commands that would enter the bubblewrap path before invoking
bwrap.
Windows
Legacy SandboxPolicy / sandbox_mode configs are still supported on
Windows. Legacy read-only and workspace-write policies imply full
filesystem read access; exact readable roots are represented by split
filesystem policies instead.
The elevated Windows sandbox also supports:
- legacy
ReadOnlyandWorkspaceWritebehavior - split filesystem policies that need exact readable roots, exact writable roots, or extra read-only carveouts under writable roots
- backend-managed system read roots required for basic execution, such as
C:\Windows,C:\Program Files,C:\Program Files (x86), andC:\ProgramData, when a split filesystem policy requests platform defaults
The unelevated restricted-token backend still supports the legacy full-read
Windows model for legacy ReadOnly and WorkspaceWrite behavior. It also
supports a narrow split-filesystem subset: full-read split policies whose
writable roots still match the legacy WorkspaceWrite root set, but add extra
read-only carveouts under those writable roots.
New [permissions] / split filesystem policies remain supported on Windows
only when they can be enforced directly by the selected Windows backend or
round-trip through the legacy SandboxPolicy model without changing semantics.
Policies that would require direct explicit unreadable carveouts (none) or
reopened writable descendants under read-only carveouts still fail closed
instead of running with weaker enforcement.
All Platforms
Expects the binary containing codex-core to simulate the virtual
apply_patch CLI when arg1 is --codex-run-as-apply-patch. See the
codex-arg0 crate for details.