fix: remove unused db.sqlite related fns

- remove sqlite-db/close! as its not used and didn't make sense to be
  used in other electron ns
- remove sqlite-db/connections atom as its not needed
- remove read-graph as its not necessary
- rename cli.persist-graph as its primary purpose has changed
- update effected scripts

scripts/src/logseq/tasks/db_graph/create_graph.cljs

@@ -7,7 +7,7 @@
             [logseq.db.sqlite.util :as sqlite-util]
             [logseq.db.sqlite.create-graph :as sqlite-create-graph]
             [logseq.db.frontend.property.util :as db-property-util]
-            [logseq.outliner.cli.persist-graph :as persist-graph]
+            [logseq.outliner.cli.pipeline :as cli-pipeline]
             [logseq.db :as ldb]
             [clojure.string :as string]
             [datascript.core :as d]
@@ -34,10 +34,9 @@
   transacts initial data"
   [dir db-name]
   (fs/mkdirSync (node-path/join dir db-name) #js {:recursive true})
-  (sqlite-db/open-db! dir db-name)
   ;; Same order as frontend.db.conn/start!
-  (let [conn (ldb/start-conn :create-default-pages? false)]
-    (persist-graph/add-listener conn db-name)
+  (let [conn (sqlite-db/open-db! dir db-name)]
+    (cli-pipeline/add-listener conn)
     (ldb/create-default-pages! conn {:db-graph? true})
     (setup-init-data conn)
     conn))

scripts/src/logseq/tasks/dev/publishing.cljs

@@ -23,8 +23,7 @@
 
 (defn- publish-db-graph [static-dir graph-dir output-path]
   (let [db-name (node-path/basename graph-dir)
-        _ (sqlite-db/open-db! (node-path/dirname graph-dir) db-name)
-        conn (sqlite-cli/read-graph db-name)
+        conn (sqlite-db/open-db! (node-path/dirname graph-dir) db-name)
         repo-config (-> (d/q '[:find ?content
                                :where [?b :file/path "logseq/config.edn"] [?b :file/content ?content]]
                              @conn)