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Logseq CLI (Node)

The Logseq CLI is a Node.js program compiled from ClojureScript that connects to a db-worker-node server managed by the CLI. When installed, the CLI binary name is logseq.

Build the CLI

npm install -g @vercel/ncc
clojure -M:cljs compile logseq-cli
yarn db-worker-node:release:bundle

yarn db-worker-node:release:bundle compiles and bundles db-worker-node with @vercel/ncc, and writes a standalone runtime to dist/db-worker-node.js plus an asset manifest at dist/db-worker-node-assets.json (which may contain an empty assets array when no extra files are required).

db-worker-node lifecycle

logseq manages db-worker-node automatically. You should not start the server manually. The server binds to localhost on a random port and records that port in the repo lock file.

Desktop + CLI shared semantics:

  • Electron desktop and CLI are expected to use the same db-worker-node and lock-file protocol for a graph.
  • Disk SQLite under ~/logseq/graphs is the source of truth; OPFS periodic export is not part of the desktop primary write path.
  • If a daemon already exists for the graph, CLI reuses it via lock-file discovery instead of starting a second writer.
  • If lock ownership is invalid or stale, startup cleans stale lock state before retrying.
  • Lock metadata includes an owner-source value (cli, electron, unknown) and lifecycle actions enforce owner boundaries.
  • server stop and server restart are owner-aware: CLI can only stop/restart servers it owns (or legacy unknown ownership).
  • If lock is missing but a matching orphan db-worker-node process still exists for the same repo/data-dir, startup performs orphan cleanup before retrying.

Run the CLI

node ./dist/logseq.js graph list

You can also use npm link to make ./dist/logseq.js globally available, run:

npm link

If installed(or linked) globally, run:

logseq graph list

Configuration

Optional configuration file: ~/logseq/cli.edn

Default data dir: ~/logseq/graphs.

Graph directories on disk are stored as user-facing graph names (for example, demo/), not logseq_db_ prefixed repo identifiers.

Migration note: If you previously used ~/.logseq/cli-graphs or ~/.logseq/cli.edn, pass --data-dir or --config to continue using those locations.

Supported keys include:

  • :graph
  • :data-dir
  • :timeout-ms
  • :output-format (use :json or :edn for scripting)
  • sync config persisted via sync config set|get|unset: :ws-url, :http-base, :e2ee-password

cli.edn no longer persists cloud auth tokens. CLI login state is stored separately in ~/logseq/auth.json.

CLI flags take precedence over environment variables, which take precedence over the config file.

Authentication

Use logseq login to authenticate the current machine with Logseq cloud.

  • logseq login starts a temporary callback server at http://localhost:8765/auth/callback, opens a browser to the Logseq Cognito Hosted UI, exchanges the returned authorization code, and writes ~/logseq/auth.json.
  • logseq logout removes ~/logseq/auth.json, opens a browser to the Cognito Hosted UI logout endpoint, and completes the browser logout flow at http://localhost:8765/logout-complete.
  • Sync commands still pass an in-memory runtime :auth-token to db-sync, but that token is now resolved from auth.json instead of cli.edn.

Default auth file: ~/logseq/auth.json

Auth file contents include the persisted Cognito id-token, access-token, refresh-token, expires-at, sub, email, and updated-at values needed for headless refresh.

Verbose logging:

  • --verbose enables structured debug logs to stderr for CLI option parsing and db-worker-node API calls.
  • sync download can stream realtime progress lines to stdout when progress is enabled; debug previews remain truncated.

Timeouts:

  • --timeout-ms continues to control request timeout behavior for CLI transport.
  • Login callback timeout is controlled separately by :login-timeout-ms / LOGSEQ_CLI_LOGIN_TIMEOUT_MS and defaults to 5 minutes.
  • Logout callback timeout is controlled separately by :logout-timeout-ms / LOGSEQ_CLI_LOGOUT_TIMEOUT_MS and defaults to 2 minutes.

Commands

Graph commands:

  • graph list - list all db graphs
  • graph create --graph <name> - create a new db graph and switch to it
  • graph switch --graph <name> - switch current graph
  • graph remove --graph <name> - remove a graph
  • graph validate --graph <name> - validate graph data
  • graph info [--graph <name>] - show graph metadata (defaults to current graph)
  • graph export --type edn|sqlite --file <path> [--graph <name>] - export a graph to EDN or SQLite
  • graph import --type edn|sqlite --input <path> --graph <name> - import a graph from EDN or SQLite (new graph only)

For any command that requires --graph, if the target graph does not exist, the CLI returns graph not exists (except for graph create). graph import fails if the target graph already exists.

Server commands:

  • server list - list running db-worker-node servers
  • server status --graph <name> - show server status for a graph
  • server start --graph <name> - start db-worker-node for a graph
  • server stop --graph <name> - stop db-worker-node for a graph
  • server restart --graph <name> - restart db-worker-node for a graph
  • doctor [--dev-script] - run runtime diagnostics for db-worker-node.js, data-dir permissions, and running server readiness (--dev-script checks static/db-worker-node.js explicitly)

Auth commands:

  • login - authenticate this machine and create/update ~/logseq/auth.json
  • logout - remove persisted CLI auth from ~/logseq/auth.json

Shell completion:

  • completion <zsh|bash> - generate shell completion script to stdout

Setup for zsh (add to ~/.zshrc):

autoload -Uz compinit && compinit
eval "$(logseq completion zsh)"

Setup for bash (add to ~/.bashrc):

eval "$(logseq completion bash)"

Server ownership behavior:

  • server stop and server restart can return server-owned-by-other if the daemon was started by another owner source.
  • server start can return server-start-timeout-orphan when lock creation times out and orphan matching processes are detected.
  • server list human output includes both OWNER and REVISION columns.
  • server list prints a compatibility warning in human output when any server revision string is not exactly equal to the local CLI revision string.
  • Structured output (--output json|edn) includes per-server revision data but does not include human warning text.

Sync commands:

  • sync status --graph <name> - show db-sync runtime state for a graph daemon
  • sync start --graph <name> - start db-sync websocket client for a graph
  • sync stop --graph <name> - stop db-sync client on a graph daemon
  • sync upload --graph <name> - upload local graph snapshot to remote
  • sync download --graph <name> [--progress true|false] - download remote graph <name> into a same-name local graph directory
  • sync remote-graphs [--graph <name>] - list remote graphs visible to the current login context
  • sync ensure-keys [--graph <name>] - ensure user RSA keys for sync/e2ee
  • sync grant-access --graph <name> --graph-id <uuid> --email <email> - grant encrypted graph access to a user
  • sync config set [--graph <name>] ws-url|http-base|e2ee-password <value> - set non-auth db-sync runtime config key
  • sync config get [--graph <name>] ws-url|http-base|e2ee-password - get non-auth db-sync runtime config key
  • sync config unset [--graph <name>] ws-url|http-base|e2ee-password - remove non-auth db-sync runtime config key

Sync upload behavior:

  • sync upload requires --graph <name>.
  • The CLI starts or reuses that graph's db-worker-node, applies the current sync config, and uploads the local snapshot only after the worker has resolved a usable remote graph id.
  • If the local graph already has sync metadata, upload reuses the stored remote graph-id.
  • If the local graph does not have a stored remote graph-id, upload first lists visible remote graphs and reuses an exact same-name match when one exists.
  • If no same-name remote graph exists, upload creates a new remote graph and persists the returned remote metadata locally before snapshot transfer.
  • Successful upload persists graph identity metadata locally in both client-op state and graph KV (logseq.kv/graph-uuid, logseq.kv/graph-remote?, and logseq.kv/graph-rtc-e2ee?) so CLI and web upload/bootstrap flows stay aligned.
  • Fresh uploads default to encrypted remote graph creation unless local sync metadata explicitly marks the graph as non-e2ee. In headless CLI mode, run logseq login first and set e2ee-password via sync config set (or in --config) before uploading encrypted graphs.
  • sync upload returns a real error instead of false success when login state, remote graph bootstrap, or snapshot upload fails.
  • Common upload failures include missing/invalid CLI login state, missing http-base, remote graph creation failure, snapshot upload failure, and local DB/worker startup failure.
  • Troubleshooting: after a successful upload, run graph info --graph <name> --output json and confirm data.kv.logseq.kv/graph-uuid is present. If it is missing, rerun sync upload for the same graph to trigger identity backfill.

Sync download behavior:

  • sync download requires --graph <name>.
  • If a local graph with the same name already exists, the CLI returns graph-exists.
  • If no remote graph with that name exists, the CLI returns remote-graph-not-found.
  • sync download starts db-worker-node in create-empty mode so local startup does not write db-initial-data before snapshot import.
  • The final snapshot download/import invoke uses a command-specific long-running timeout (30 minutes by default) rather than the generic short-request timeout path.
  • Progress streaming uses db-worker-node SSE /v1/events and shared :rtc.log/download events.
  • --progress defaults to true for human output.
  • For structured output (--output json|edn), progress is auto-disabled unless explicitly overridden with --progress true.
  • --progress false always suppresses progress streaming.
  • If the target graph DB is not empty at download time, the CLI returns graph-db-not-empty and aborts before import.
  • For e2ee remote graphs in headless CLI mode, run logseq login first and set e2ee-password via sync config set (or in --config) before download.

Sync config persistence:

  • sync config set/unset writes non-auth sync config to the CLI config file selected by --config.
  • If --config is not provided, the default config path is ~/logseq/cli.edn.
  • sync config get reads from that same config source.
  • Cloud auth is persisted separately in ~/logseq/auth.json.

Inspect and edit commands:

  • list page [--expand] [--limit <n>] [--offset <n>] [--sort <field>] [--order asc|desc] - list pages
  • list tag [--expand] [--limit <n>] [--offset <n>] [--sort <field>] [--order asc|desc] - list tags
  • list property [--expand] [--limit <n>] [--offset <n>] [--sort <field>] [--order asc|desc] - list properties (TYPE is included by default even without --expand)
  • upsert block --content <text> [--target-page <name>|--target-id <id>|--target-uuid <uuid>] [--pos first-child|last-child|sibling] - create blocks; defaults to todays journal page if no target is given
  • upsert block --blocks <edn> [--target-page <name>|--target-id <id>|--target-uuid <uuid>] [--pos first-child|last-child|sibling] - insert blocks via EDN vector
  • upsert block --blocks-file <path> [--target-page <name>|--target-id <id>|--target-uuid <uuid>] [--pos first-child|last-child|sibling] - insert blocks from an EDN file
  • upsert block --id <id>|--uuid <uuid> [--target-id <id>|--target-uuid <uuid>|--target-page <name>] [--pos first-child|last-child|sibling] [--update-tags <edn-vector>] [--update-properties <edn-map>] [--remove-tags <edn-vector>] [--remove-properties <edn-vector>] - update and/or move a block
  • upsert page --page <name> [--update-tags <edn-vector>] [--update-properties <edn-map>] [--remove-tags <edn-vector>] [--remove-properties <edn-vector>] - create (or update by page name) a page
  • upsert page --id <id> [--update-tags <edn-vector>] [--update-properties <edn-map>] [--remove-tags <edn-vector>] [--remove-properties <edn-vector>] - update a page by id (cannot be combined with --page)
  • upsert tag --name <name> - create or upsert a tag by name
  • upsert tag --id <id> [--name <name>] - validate a tag by id; when --name is provided, rename that tag id (no-op if normalized name is unchanged)
  • upsert tag --id <id> --name <name> conflicts: returns tag-name-conflict when target name is a non-tag page, and tag-rename-conflict when target name is another existing tag
  • upsert property --name <name> [--type <type>] [--cardinality one|many] [--hide true|false] [--public true|false] - create or update a property by name
  • upsert property --id <id> [--type <type>] [--cardinality one|many] [--hide true|false] [--public true|false] - update a property by id
  • move --id <id>|--uuid <uuid> --target-id <id>|--target-uuid <uuid>|--target-page <name> [--pos first-child|last-child|sibling] - move a block and its children (defaults to first-child)
  • remove --id <id>|--uuid <uuid>|--page <name> - remove blocks (by db/id or UUID) or pages
  • search <query> [--type page|block|tag|property|all] [--tag <name>] [--case-sensitive] [--sort updated-at|created-at] [--order asc|desc] - search across pages, blocks, tags, and properties (query is positional)
  • query --query <edn> [--inputs <edn-vector>] - run a Datascript query against the graph
  • query --name <query-name> [--inputs <edn-vector>] - run a named query (built-in or from cli.edn)
  • query list - list available named queries
  • show --page <name> [--level <n>] - show page tree
  • show --uuid <uuid> [--level <n>] - show block tree
  • show --id <id> [--level <n>] - show block tree by db/id

Help output:

Subcommands:
  list page [options]      List pages
  list tag [options]       List tags
  list property [options]  List properties
  upsert block [options]   Upsert block
  upsert page [options]    Upsert page
  upsert tag [options]     Upsert tag
  upsert property [options] Upsert property
  move [options]           Move block
  remove [options]         Remove block or page
  search <query> [options] Search graph
  show [options]           Show tree

Options grouping:

  • Help output separates Global options (apply to all commands) and Command options (command-specific flags).

Version output:

  • logseq --version prints:
Build time: <timestamp>
Revision: <commit>

Output formats:

  • Global --output <human|json|edn> applies to all commands
  • Output formatting is controlled via global --output, :output-format in config, or LOGSEQ_CLI_OUTPUT.
  • Human output is plain text. List/search commands render tables with a final Count: N line. For list and search subcommands, the ID column uses :db/id (not UUID). If :db/ident exists, an IDENT column is included. list property includes a dedicated TYPE column. Search table columns are ID and TITLE. Block titles can include multiple lines; multi-line rows align additional lines under the TITLE column. Times such as list UPDATED-AT/CREATED-AT and graph info Created at are shown in human-friendly relative form. Errors include error codes and may include a Hint: line. Use --output json|edn for structured output.
  • sync download progress lines are streamed to stdout only when progress is enabled. In json/edn mode, progress is disabled by default unless --progress true is provided.
  • For list property, TYPE is returned in default output (without --expand) for human and structured (json/edn) formats.
  • upsert page and upsert block return entity ids in data.result for JSON/EDN output, and include ids in human output.
    • Human example:
      Upserted page:
      [123]
      
    • Human example:
      Upserted blocks:
      [201 202]
      
    • JSON example: {"status":"ok","data":{"result":[123]}}
    • EDN example: {:status :ok, :data {:result [123]}}
  • doctor output includes overall status (ok, warning, error) and per-check rows for db-worker-script, data-dir, running-servers, and server-revision-mismatch. For scripting, --output json|edn keeps the structured check payload.
  • Common doctor failures and warnings:
    • doctor-script-missing: db-worker-node.js runtime target is missing (default target: dist/db-worker-node.js; use doctor --dev-script to check static/db-worker-node.js).
    • doctor-script-unreadable: script path exists but is not a readable file.
    • data-dir-permission: configured data dir is not readable or writable.
    • doctor-server-not-ready: one or more lock-discovered servers are still in :starting state (warning).
    • doctor-server-revision-mismatch: one or more discovered servers use a different revision than the local CLI revision (warning). Follow the printed remediation command for each affected graph: logseq server restart --graph <name>.
    • If bundled runtime startup fails with missing-module or missing-file errors, rebuild with yarn db-worker-node:release:bundle and confirm dist/db-worker-node.js exists and every path listed in dist/db-worker-node-assets.json is present next to it.
  • query human output returns a plain string (the query result rendered via pr-str), which is convenient for pipelines like logseq query ... | xargs logseq show --id.
  • Built-in named queries currently include block-search, task-search, recent-updated, list-status, and list-priority. Use query list to see the full set for your config.
  • Show and search outputs resolve block reference UUIDs inside text, replacing [[<uuid>]] with the referenced block content. Nested references are resolved recursively up to 10 levels to avoid excessive expansion. For example: [[<uuid1>]][[some text [[<uuid2>]]]] and then <uuid2> is also replaced.
  • show human output prints the :db/id as the first column followed by a tree:
id1 block1
id2 ├── b2
id3 │   └── b3
id4 ├── b4
id5 │   ├── b5
id6 │   │   └── b6
id7 │   └── b7
id8 └── b8

Troubleshooting:

  • If authenticated sync commands fail with missing or invalid local auth, run logseq logout and then logseq login again.
  • You can also manually remove ~/logseq/auth.json and repeat logseq login.

Examples:

node ./dist/logseq.js login
node ./dist/logseq.js graph create --graph demo
node ./dist/logseq.js graph export --type edn --file /tmp/demo.edn --graph demo
node ./dist/logseq.js graph import --type edn --input /tmp/demo.edn --graph demo-import
node ./dist/logseq.js upsert block --target-page TestPage --content "hello world"
node ./dist/logseq.js move --uuid <uuid> --target-page TargetPage
node ./dist/logseq.js search "hello"
node ./dist/logseq.js show --page TestPage --output json
node ./dist/logseq.js server list
node ./dist/logseq.js doctor
node ./dist/logseq.js doctor --dev-script
node ./dist/logseq.js doctor --output json
node ./dist/logseq.js logout